ProtoMol - an object-oriented component based framework for Molecular Dynamics simulations.
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ProtoMol::XYZReader Class Reference

#include <XYZReader.h>

Inheritance diagram for ProtoMol::XYZReader:

ProtoMol::Reader ProtoMol::File List of all members.

Public Member Functions

 XYZReader ()
 XYZReader (const std::string &filename)
virtual ~XYZReader ()
virtual bool open ()
virtual bool open (const std::string &filename)
virtual bool open (const char *filename)
virtual bool tryFormat ()
virtual bool read ()
bool read (XYZ &xyz)
bool read (Vector3DBlock &coords, std::vector< std::string > &names)
XYZ getXYZ () const
Vector3DBlock * orphanCoords ()
std::vector< std::string > * orphanNames ()

Private Attributes

Vector3DBlock * myCoords
std::vector< std::string > * myNames

Friends

XYZReader & operator>> (XYZReader &xyzReader, XYZ &xyz)
XYZReader & operator>> (XYZReader &xyzReader, Vector3DBlock &coords)

Detailed Description

Reads a XYZ format file (ASCII).

Constructor & Destructor Documentation

ProtoMol::XYZReader::XYZReader (   ) 
 

ProtoMol::XYZReader::XYZReader (  const std::string &  filename  )  [explicit]
 

ProtoMol::XYZReader::~XYZReader (   )  [virtual]
 

Member Function Documentation

XYZ ProtoMol::XYZReader::getXYZ (   )  const
 

virtual bool ProtoMol::XYZReader::open (  const char *  filename  )  [inline, virtual]
 

Implements ProtoMol::File.

virtual bool ProtoMol::XYZReader::open (  const std::string &  filename  )  [inline, virtual]
 

Implements ProtoMol::File.

virtual bool ProtoMol::XYZReader::open (   )  [inline, virtual]
 

Implements ProtoMol::File.

Vector3DBlock * ProtoMol::XYZReader::orphanCoords (   ) 
 

vector< string > * ProtoMol::XYZReader::orphanNames (   ) 
 

bool ProtoMol::XYZReader::read (  Vector3DBlock &  coords,
std::vector< std::string > &  names
) 
 

bool ProtoMol::XYZReader::read (  XYZ &  xyz  ) 
 

bool ProtoMol::XYZReader::read (   )  [virtual]
 

Simple test, true if it the format might be correct/readable.

Implements ProtoMol::Reader.

bool ProtoMol::XYZReader::tryFormat (   )  [virtual]
 

Implements ProtoMol::Reader.

Friends And Related Function Documentation

XYZReader& operator>> (  XYZReader &  xyzReader,
Vector3DBlock &  coords
)  [friend]
 

XYZReader& operator>> (  XYZReader &  xyzReader,
XYZ &  xyz
)  [friend]
 

Member Data Documentation

Vector3DBlock* ProtoMol::XYZReader::myCoords [private]
 

std::vector<std::string>* ProtoMol::XYZReader::myNames [private]
 

The documentation for this class was generated from the following files: Last update: . GNU GENERAL PUBLIC LICENSE, copyrighted by the University of Notre Dame and the University of Bergen, Norway.