ProtoMol - an object-oriented component based framework for Molecular Dynamics simulations.

ProtoMol::OutputPaulTrap Class Reference

#include <OutputPaulTrap.h>

Inheritance diagram for ProtoMol::OutputPaulTrap:

List of all members.


Public Member Functions
	OutputPaulTrap ()
	OutputPaulTrap (const std::string &filename, int freq, int cacheFreq, int cacheSize, Real closeTime, Real omegar, Real omegaz, const std::string &filenameLow, bool doLow, bool screen)
virtual std::string	getIdNoAlias () const
virtual unsigned int	getParameterSize () const
virtual void	getParameters (std::vector< Parameter > &parameter) const
virtual bool	adjustWithDefaultParameters (std::vector< Value > &values, const Configuration *config) const
Static Public Attributes
const std::string	keyword
Private Member Functions
virtual void	doRunCached (int step)
virtual void	doFlushCache ()
virtual Output *	doMake (std::string &errMsg, const std::vector< Value > &values) const
virtual void	doInitialize ()
void	doWrite ()
Private Attributes
Real	myOmegaR
Real	myOmegaZ
std::string	myFilenameLow
bool	myDoPaulLow
bool	myScreen
Real	myPaulOmega
Real	myPaulQ
Real	myPaulK
Real	myPaulR
Real	myPaulA
Real	myPaulUHom
Real	myPaulF
Real	myPaulF2
Real	myPaulM
Real	myPaulLow
std::string	myLowOut
Vector3DBlock	myLowXYZ
std::string	myLowComment
std::string	myUnit
Real	myFactor

Constructor & Destructor Documentation

ProtoMol::OutputPaulTrap::OutputPaulTrap ( )

ProtoMol::OutputPaulTrap::OutputPaulTrap ( const std::string & filename,

int freq,

int cacheFreq,

int cacheSize,

Real closeTime,

Real omegar,

Real omegaz,

const std::string & filenameLow,

bool doLow,

bool screen

)

Member Function Documentation

bool ProtoMol::OutputPaulTrap::adjustWithDefaultParameters ( std::vector< Value > & values,

const Configuration * config

) const [virtual]

Reimplemented from ProtoMol::OutputFile.

void ProtoMol::OutputPaulTrap::doFlushCache ( ) [private, virtual]

optional implemenatation for cache flush

Reimplemented from ProtoMol::OutputFile.

void ProtoMol::OutputPaulTrap::doInitialize ( ) [private, virtual]

Hook method of initialize, implemented in the concrete class.

Implements ProtoMol::Output.

virtual Output* ProtoMol::OutputPaulTrap::doMake ( std::string & errMsg,

const std::vector< Value > & values

) const [private, virtual]

Implements ProtoMol::Output.

void ProtoMol::OutputPaulTrap::doRunCached ( int step ) [private, virtual]

new implementation of run method

Implements ProtoMol::OutputFile.

void ProtoMol::OutputPaulTrap::doWrite ( ) [private]

virtual std::string ProtoMol::OutputPaulTrap::getIdNoAlias ( ) const [inline, virtual]

Implements ProtoMol::Makeable.

void ProtoMol::OutputPaulTrap::getParameters ( std::vector< Parameter > & parameter ) const [virtual]

retrieve all parameters

Reimplemented from ProtoMol::OutputFile.