ProtoMol - an object-oriented component based framework for Molecular Dynamics simulations.
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ProtoMol::OutputPDBFramePos Class Reference

#include <OutputPDBFramePos.h>

Inheritance diagram for ProtoMol::OutputPDBFramePos:

ProtoMol::Output ProtoMol::Makeable List of all members.

Public Member Functions

 OutputPDBFramePos ()
 OutputPDBFramePos (const std::string &filename, int freq)
virtual std::string getIdNoAlias () const
virtual unsigned int getParameterSize () const
virtual void getParameters (std::vector< Parameter > &parameter) const
virtual bool adjustWithDefaultParameters (std::vector< Value > &values, const Configuration *config) const

Static Public Attributes

const std::string keyword

Private Member Functions

virtual Output * doMake (std::string &errMsg, const std::vector< Value > &values) const
virtual void doInitialize ()
virtual void doRun (int step)
virtual void doFinalize (int)

Private Attributes

std::string myFilename

Constructor & Destructor Documentation

ProtoMol::OutputPDBFramePos::OutputPDBFramePos (   ) 
 

ProtoMol::OutputPDBFramePos::OutputPDBFramePos (  const std::string &  filename,
int  freq
) 
 

Member Function Documentation

bool ProtoMol::OutputPDBFramePos::adjustWithDefaultParameters (  std::vector< Value > &  values,
const Configuration *  config
)  const [virtual]
 

Reimplemented from ProtoMol::Makeable.

virtual void ProtoMol::OutputPDBFramePos::doFinalize (  int   )  [inline, private, virtual]
 

Hook method of finalize, implemented in the concrete class.

Implements ProtoMol::Output.

virtual void ProtoMol::OutputPDBFramePos::doInitialize (   )  [inline, private, virtual]
 

Hook method of initialize, implemented in the concrete class.

Implements ProtoMol::Output.

virtual Output* ProtoMol::OutputPDBFramePos::doMake (  std::string &  errMsg,
const std::vector< Value > &  values
)  const [private, virtual]
 

Implements ProtoMol::Output.

void ProtoMol::OutputPDBFramePos::doRun (  int  step  )  [private, virtual]
 

Hook method of run, implemented in the concrete class.

Implements ProtoMol::Output.

virtual std::string ProtoMol::OutputPDBFramePos::getIdNoAlias (   )  const [inline, virtual]
 

Implements ProtoMol::Makeable.

void ProtoMol::OutputPDBFramePos::getParameters (  std::vector< Parameter > &  parameter  )  const [virtual]
 

retrieve all parameters

Implements ProtoMol::Makeable.

virtual unsigned int ProtoMol::OutputPDBFramePos::getParameterSize (   )  const [inline, virtual]
 

number of parameters

Implements ProtoMol::Makeable.

Member Data Documentation

const string ProtoMol::OutputPDBFramePos::keyword [static]
 

std::string ProtoMol::OutputPDBFramePos::myFilename [private]
 

The documentation for this class was generated from the following files: Last update: . GNU GENERAL PUBLIC LICENSE, copyrighted by the University of Notre Dame and the University of Bergen, Norway.