| addToForceGroup(ForceGroup *forceGroup) | ProtoMol::SystemForce | [virtual] |
| adjustAlias(T *obj) const | ProtoMol::Makeable | [inline, protected] |
| adjustWithDefaultParameters(std::vector< Value > &values, const Configuration *) const | ProtoMol::Makeable | [inline, virtual] |
| BoundaryConditions typedef | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [protected] |
| CellPairType typedef | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [protected] |
| checkParameters(std::string &errMsg, const std::vector< Value > &values) const | ProtoMol::Makeable | |
| checkParameters(const std::vector< Value > &values) const | ProtoMol::Makeable | |
| checkParameterTypes(const std::vector< Value > &values) const | ProtoMol::Makeable | |
| copy(T *obj) | ProtoMol::Makeable | [inline, static] |
| doEvaluate(const GenericTopology *topo, unsigned int n) | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [protected] |
| enumerator | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [protected] |
| EnumeratorType typedef | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [protected] |
| evaluate(const GenericTopology *, const Vector3DBlock *, Vector3DBlock *, ScalarStructure *) | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [virtual] |
| Force() | ProtoMol::Force | [inline] |
| getAlias() const | ProtoMol::Makeable | |
| getDefinition() const | ProtoMol::Makeable | [virtual] |
| getId() const | ProtoMol::Makeable | |
| getIdNoAlias() const | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [virtual] |
| getKeyword() const | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [inline, virtual] |
| getParameters(std::vector< Parameter > ¶meters) const | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [virtual] |
| ProtoMol::SystemForce::getParameters() const | ProtoMol::Makeable | |
| getParameterSize() const | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [inline, virtual] |
| getScope() const | ProtoMol::Force | [inline, virtual] |
| getText() const | ProtoMol::Makeable | [inline, virtual] |
| make(std::string &errMsg, const std::vector< Value > &values) const | ProtoMol::Force | |
| makeCompareForce(Force *actualForce, CompareForce *compareForce) const | ProtoMol::SystemForce | [virtual] |
| makeTimeForce(Force *actualForce) const | ProtoMol::SystemForce | [virtual] |
| myCutoff | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [protected] |
| myOneAtomPair | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [protected] |
| NonbondedCutoffForce() | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [inline] |
| NonbondedCutoffForce(Real cutoff, TOneAtomPaironeAtomPair) | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [inline] |
| NonbondedCutoffSystemForce() | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [inline] |
| NonbondedCutoffSystemForce(Real cutoff, TOneAtomPair oneAtomPair) | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [inline] |
| numberOfBlocks(const GenericTopology *topo, const Vector3DBlock *positions) | ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, SystemForce, NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > > | [inline, virtual] |
| parallelEvaluate(const GenericTopology *topo, const Vector3DBlock *pos, Vector3DBlock *f, ScalarStructure *e) | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [virtual] |
| RealTopologyType typedef | ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | [protected] |
| scope | ProtoMol::Force | [static] |
| setAlias(const std::string &id) | ProtoMol::Makeable | |
| setParameter(std::string &errMsg, const std::string &key, T val) | ProtoMol::Force | [inline] |
| setParameter(std::string &errMsg, unsigned int index, T val) | ProtoMol::Force | [inline] |
| setParameters(std::string &errMsg, std::vector< Value > value) | ProtoMol::Force | |
| setParametersBySwapping(T *obj, std::string &errMsg, std::vector< Value > values) | ProtoMol::Force | [inline, protected] |
| SystemForce() | ProtoMol::SystemForce | [inline] |
| uncache() | ProtoMol::Force | [inline, virtual] |
| ~Force() | ProtoMol::Force | [inline, virtual] |
| ~Makeable() | ProtoMol::Makeable | [inline, virtual] |
| ~SystemForce() | ProtoMol::SystemForce | [inline, virtual] |
Last update: . GNU GENERAL PUBLIC LICENSE, copyrighted by the University of Notre Dame and the University of
Bergen, Norway.