| ProtoMol::AbstractEnumType< T, noCase > | |
| ProtoMol::Angle | This class contains the information for one Angle |
| ProtoMol::AngleInfo | |
| ProtoMol::AngleSystemForce< TBoundaryConditions > | |
| ProtoMol::AngleSystemForceBase | |
| ProtoMol::Array< T, N > | |
| ProtoMol::Array< T, N >::RefArray< N > | |
| ProtoMol::Array< T, N >::RefArray< 1 > | |
| ProtoMol::Array< T, 0 > | |
| ProtoMol::Array< T, 1 > | |
| ProtoMol::ArrayCellListStructure | |
| ProtoMol::ArraySize< N > | |
| ProtoMol::ArraySizes | |
| ProtoMol::Atom | |
| ProtoMol::AtomType | |
| ProtoMol::BankLennardJonesParameterTable | |
| ProtoMol::BBKIntegrator | |
| ProtoMol::Bond | |
| ProtoMol::Bond::Constraint | |
| ProtoMol::BondSystemForce< TBoundaryConditions > | |
| ProtoMol::BondSystemForceBase | |
| ProtoMol::BSpline | |
| ProtoMol::BSplineEnum | BSpline MOLLY types |
| ProtoMol::BSplineMOLLYIntegrator | |
| ProtoMol::BSplineMOLLYIntegrator::AngleIndex | |
| ProtoMol::BSplineMOLLYIntegrator::BondIndex | |
| ProtoMol::C1SwitchingFunction | |
| ProtoMol::C1SwitchingFunctionBase | |
| ProtoMol::C2SwitchingFunction | |
| ProtoMol::C2SwitchingFunctionBase | |
| ProtoMol::CellListEnumerator< TBoundaryConditions, TCellManager > | |
| ProtoMol::CellListEnumerator< PeriodicBoundaryConditions, CubicCellManager > | |
| ProtoMol::CellListEnumerator< PeriodicBoundaryConditions, CubicCellManager >::CellPair | |
| ProtoMol::CellListEnumerator< VacuumBoundaryConditions, CubicCellManager > | |
| ProtoMol::CellListEnumerator< VacuumBoundaryConditions, CubicCellManager >::CellPair | |
| ProtoMol::CompareForce | |
| ProtoMol::CompareForce::CompareError | |
| ProtoMol::ComplementSwitchingFunction< TOriginalSwitchingFunction > | |
| ProtoMol::ComplementSwitchingFunctionBase | |
| ProtoMol::Configuration | |
| ProtoMol::ConfigurationReader | |
| ProtoMol::ConstraintValueEnum | Map of Value constraints |
| ProtoMol::ConstraintValueEnum::Enum2Type< e > | |
| ProtoMol::CoulombEwaldRealForce | |
| ProtoMol::CoulombEwaldRealTableForce | |
| ProtoMol::CoulombForce | |
| ProtoMol::CoulombForce::C1 | |
| ProtoMol::CoulombForce::C2 | |
| ProtoMol::CoulombForce::C3 | |
| ProtoMol::CoulombForce::C4 | |
| ProtoMol::CoulombMultiGridDirectForce< TKernel > | |
| ProtoMol::CoulombMultiGridDirectForceBase | |
| ProtoMol::CoulombMultiGridDirectTableForce< TKernel > | |
| ProtoMol::CoulombMultiGridDirectTableForceBase | |
| ProtoMol::CubicCellLocation | |
| ProtoMol::CubicCellManager | |
| ProtoMol::CutoffSwitchingFunction | |
| ProtoMol::CutoffSwitchingFunctionBase | |
| ProtoMol::Cycles | |
| ProtoMol::DCDTrajectoryReader | |
| ProtoMol::DCDTrajectoryWriter | |
| ProtoMol::Report::debug | |
| ProtoMol::DebugPostConstraint | |
| ProtoMol::DebugPreConstraint | |
| ProtoMol::DihedralHMCIntegrator | |
| ProtoMol::DihedralSystemForce< TBoundaryConditions > | |
| ProtoMol::DihedralSystemForceBase | |
| ProtoMol::DLMCIntegrator | |
| ProtoMol::DMDLeapfrogIntegrator | |
| ProtoMol::ElectricFieldSystemForce< TBoundaryConditions, TSwitchingFunction, TConstraint > | |
| ProtoMol::ElectricFieldSystemForceBase | |
| ProtoMol::Endian | |
| ProtoMol::Enum2ValueTraits< ValueType::BOOL > | |
| ProtoMol::Enum2ValueTraits< ValueType::FORCE > | |
| ProtoMol::Enum2ValueTraits< ValueType::INT > | |
| ProtoMol::Enum2ValueTraits< ValueType::INTEGRATOR > | |
| ProtoMol::Enum2ValueTraits< ValueType::REAL > | |
| ProtoMol::Enum2ValueTraits< ValueType::STRING > | |
| ProtoMol::Enum2ValueTraits< ValueType::UINT > | |
| ProtoMol::Enum2ValueTraits< ValueType::VECTOR > | |
| ProtoMol::Enum2ValueTraits< ValueType::VECTOR3D > | |
| ProtoMol::EquilibriumMOLLYIntegrator | |
| ProtoMol::EquilibriumMOLLYIntegrator::HydrogenBond | |
| ProtoMol::ExclusionEnum | |
| ProtoMol::ExclusionPair | |
| ProtoMol::ExclusionTable | |
| ProtoMol::ExtendedCompareForce | |
| ProtoMol::ExtendedForce | |
| ProtoMol::ExtendedTimeForce | |
| ProtoMol::ExternalGravitationSystemForce | |
| ProtoMol::ExternalMagneticFieldExtendedForce | |
| ProtoMol::Factory< Type > | |
| ProtoMol::FactoryBase< Type > | |
| ProtoMol::FactoryTraits< Force > | |
| ProtoMol::FactoryTraits< GenericTopology > | |
| ProtoMol::FactoryTraits< Integrator > | |
| ProtoMol::FactoryTraits< Output > | |
| ProtoMol::FFTComplex | |
| ProtoMol::FFTInternal | |
| ProtoMol::File | |
| ProtoMol::TypeSelection::Float< size > | |
| ProtoMol::Force | |
| ProtoMol::ForceFactoryDetails | |
| ProtoMol::ForceFactoryDetails::ForceType | |
| ProtoMol::ForceGroup | |
| Format | |
| ProtoMol::FrictionExtendedForce | |
| ProtoMol::GenericTopology | |
| ProtoMol::GravitationForce | |
| ProtoMol::Grid< TInterpolation > | |
| ProtoMol::Grid< TInterpolation >::Int3D | |
| ProtoMol::Grid< TInterpolation >::Interpolation3D | 3d interpolation |
| ProtoMol::HapticSystemForce | |
| HapticSystemForceBase | |
| ProtoMol::HarmDihedralSystemForce< TBoundaryConditions > | |
| ProtoMol::HarmDihedralSystemForceBase | |
| ProtoMol::HBondConstraint | |
| ProtoMol::HelpText | |
| ProtoMol::HelpTextFactory | |
| ProtoMol::Hermite | |
| ProtoMol::HMCIntegrator | |
| ProtoMol::IMDElf | |
| ProtoMol::IMD::IMDEnergies | |
| ProtoMol::IMD::IMDheader | |
| ProtoMol::ImproperSystemForce< TBoundaryConditions > | |
| ProtoMol::ImproperSystemForceBase | |
| ProtoMol::ImpulseIntegrator | |
| ProtoMol::InputBoundaryConditionsIdentifier | |
| ProtoMol::InputCellManagerIdentifier | |
| ProtoMol::InputConfigIdentifier | |
| ProtoMol::InputDebugIdentifier | |
| ProtoMol::InputDihedralMultPSFIdentifier | |
| ProtoMol::InputFirststepIdentifier | |
| ProtoMol::InputIntegratorIdentifier | |
| ProtoMol::InputMaxPackagesIdentifier | |
| ProtoMol::InputMolVirialCalcIdentifier | |
| ProtoMol::InputNumstepsIdentifier | |
| ProtoMol::InputOutputfreqIdentifier | |
| ProtoMol::InputOutputIdentifier | |
| ProtoMol::InputParallelModeIdentifier | |
| ProtoMol::InputParallelPipeIdentifier | |
| ProtoMol::InputPARIdentifier | |
| ProtoMol::InputPDBScalingIdentifier | |
| ProtoMol::InputPositionsIdentifier | |
| ProtoMol::InputPosVel | |
| ProtoMol::InputPosVelEnum | |
| ProtoMol::InputPSFIdentifier | |
| ProtoMol::InputRattleEpsilonIdentifier | |
| ProtoMol::InputRattleIdentifier | |
| ProtoMol::InputRattleMaxIterIdentifier | |
| ProtoMol::InputReducedImageIdentifier | |
| ProtoMol::InputRemoveAngularMomentumIdentifier | |
| ProtoMol::InputRemoveLinearMomentumIdentifier | |
| ProtoMol::InputSeedIdentifier | |
| ProtoMol::InputShakeEpsilonIdentifier | |
| ProtoMol::InputShakeIdentifier | |
| ProtoMol::InputShakeMaxIterIdentifier | |
| ProtoMol::InputTemperatureIdentifier | |
| ProtoMol::InputUseBarrierIdentifier | |
| ProtoMol::InputValue< TBase, type, constraint > | |
| ProtoMol::InputVelocitiesIdentifier | |
| ProtoMol::InputVirialCalcIdentifier | |
| ProtoMol::TypeSelection::Int< size > | |
| ProtoMol::Integrator | |
| ProtoMol::IntegratorDefinition | |
| ProtoMol::IntegratorFactoryDetails | |
| ProtoMol::IntegratorFactoryDetails::IntegratorInput | |
| ProtoMol::iSGAngleSystemForce< TBoundaryConditions > | |
| ProtoMol::iSGAngleSystemForceBase | |
| ProtoMol::iSGBondSystemForce< TBoundaryConditions > | |
| ProtoMol::iSGBondSystemForceBase | |
| ProtoMol::iSGCoulombEwaldRealForce | |
| ProtoMol::iSGCoulombEwaldRealTableForce | |
| ProtoMol::iSGCoulombForce | |
| ProtoMol::iSGCoulombForce::C1 | |
| ProtoMol::iSGCoulombForce::C2 | |
| ProtoMol::iSGCoulombForce::C3 | |
| ProtoMol::iSGCoulombForce::C4 | |
| ProtoMol::iSGDihedralSystemForce< TBoundaryConditions > | |
| ProtoMol::iSGDihedralSystemForceBase | |
| ProtoMol::iSGGrid< TInterpolation > | |
| ProtoMol::iSGGrid< TInterpolation >::Int3D | |
| ProtoMol::iSGGrid< TInterpolation >::Interpolation3D | |
| ProtoMol::iSGIdealGasCoulombForce | |
| ProtoMol::iSGIdealGasCoulombForce::C1 | |
| ProtoMol::iSGIdealGasCoulombForce::C2 | |
| ProtoMol::iSGIdealGasCoulombForce::C3 | |
| ProtoMol::iSGIdealGasCoulombForce::C4 | |
| ProtoMol::iSGIdealGasLennardJonesForce | |
| ProtoMol::iSGImproperSystemForce< TBoundaryConditions > | |
| ProtoMol::iSGImproperSystemForceBase | |
| ProtoMol::iSGIntegrator | |
| ProtoMol::iSGLennardJonesForce | |
| ProtoMol::iSGLennardJonesTableForce | |
| ProtoMol::iSGModifierPostForceChemostat | |
| ProtoMol::iSGModifierPreForceChemostat | |
| ProtoMol::iSGMTorsionSystemForce< TBoundaryConditions > | |
| ProtoMol::iSGNonbondedFullEwaldSystemForce< TBoundaryConditions, TCellManager, real, reciprocal, correction, TSwitchingFunction > | |
| ProtoMol::iSGNonbondedFullEwaldSystemForceBase | |
| ProtoMol::iSGNonbondedPMEwaldSystemForce< TBoundaryConditions, TCellManager, real, reciprocal, correction, TInterpolation, TSwitchingFunction > | |
| ProtoMol::iSGNonbondedPMEwaldSystemForceBase | |
| ProtoMol::iSGOneAtomPair< TBoundaryConditions, TSwitchingFunction, TNonbondedForce, TConstraint > | |
| ProtoMol::iSGOneAtomPairFull< TBoundaryConditions, TSwitchingFunction, TNonbondedForce, TConstraint > | |
| ProtoMol::iSGOneAtomPairTwo< TBoundaryConditions, TSwitchingFunctionFirst, TNonbondedForceFirst, TSwitchingFunctionSecond, TNonbondedForceSecond, TConstraint > | |
| ProtoMol::iSGOneAtomPairTwoFull< TBoundaryConditions, TSwitchingFunctionFirst, TNonbondedForceFirst, TSwitchingFunctionSecond, TNonbondedForceSecond, TConstraint > | |
| ProtoMol::iSGPAR | |
| ProtoMol::iSGPAR::Angle | |
| ProtoMol::iSGPAR::AtomType | This class contains information common to one type of atom |
| ProtoMol::iSGPAR::Bond | |
| ProtoMol::iSGPAR::Dihedral | |
| ProtoMol::iSGPAR::Improper | |
| ProtoMol::iSGPAR::Nonbonded | This structure holds data for an atom's nonbonded parameters |
| ProtoMol::iSGPARReader | |
| std::istringstream | |
| ProtoMol::Lagrange | |
| ProtoMol::LangevinImpulseIntegrator | |
| ProtoMol::LeapfrogIntegrator | |
| ProtoMol::LennardJonesForce | |
| ProtoMol::LennardJonesParameters | The Lennard-Jones parameters for one pair of atom types |
| ProtoMol::LennardJonesParameterTable | |
| ProtoMol::LennardJonesTableForce | |
| ProtoMol::ltstrNocase | |
| ProtoMol::MagneticDipoleForce | |
| ProtoMol::MagneticDipoleMirrorSystemForce< TBoundaryConditions > | |
| ProtoMol::MagneticDipoleMirrorSystemForceBase | |
| ProtoMol::Makeable | |
| ProtoMol::MakeableDefinition | |
| ProtoMol::Matrix3by3 | |
| ProtoMol::MCIntegrator | |
| ProtoMol::MetaForce | |
| ProtoMol::Modifier | |
| ProtoMol::ModifierAveraging | |
| ProtoMol::ModifierFriction | |
| ProtoMol::ModifierIncrementTimestep | |
| ProtoMol::ModifierISG | |
| ProtoMol::ModifierISG::TransformMap | |
| ProtoMol::ModifierMetaRattle | |
| ProtoMol::ModifierMetaRattleShake | |
| ProtoMol::ModifierMetaShake | |
| ProtoMol::ModifierMollification | |
| ProtoMol::ModifierNPTRattle< TIntegrator > | |
| ProtoMol::ModifierNPTRattleDetails | |
| ProtoMol::ModifierNPTShake< TIntegrator > | |
| ProtoMol::ModifierNPTShakeDetails | |
| ProtoMol::ModifierNVTRattle< TIntegrator > | |
| ProtoMol::ModifierNVTRattleDetails | |
| ProtoMol::ModifierNVTShake< TIntegrator > | |
| ProtoMol::ModifierNVTShakeDetails | |
| ProtoMol::ModifierPostForceBarostat< TIntegrator > | |
| ProtoMol::ModifierPostForceThermostat< TIntegrator > | |
| ProtoMol::ModifierPreForceBarostat< TIntegrator > | |
| ProtoMol::ModifierPreForceThermostat< TIntegrator > | |
| ProtoMol::ModifierRattle | |
| ProtoMol::ModifierRemoveAngularMomentum | |
| ProtoMol::ModifierRemoveLinearMomentum | |
| ProtoMol::ModifierShake | |
| ProtoMol::ModifierUmbrella | |
| ProtoMol::ModifierUpdateBeta | |
| ProtoMol::ModifierUpdateBetaAndPush | |
| ProtoMol::Molecule | |
| ProtoMol::MollyForce | |
| ProtoMol::MOLLYIntegrator | |
| ProtoMol::MTorsionSystemForce< TBoundaryConditions > | |
| ProtoMol::MTSIntegrator | |
| ProtoMol::MultiGrid< TInterpolation, TKernel, pbcX, pbcY, pbcZ > | |
| ProtoMol::MultiGrid< TInterpolation, TKernel, pbcX, pbcY, pbcZ >::Int3D | |
| ProtoMol::MultiGrid< TInterpolation, TKernel, pbcX, pbcY, pbcZ >::Interpolation3D | 3D interpolation |
| ProtoMol::Report::MyStreamer | |
| ProtoMol::IMD::netint | |
| ProtoMol::NoConstraint | |
| ProtoMol::NonbondedCutoffForce< TCellManager, TOneAtomPair, TForce, TImplForce > | |
| ProtoMol::NonbondedCutoffForceBase | |
| ProtoMol::NonbondedCutoffMollyForce< TCellManager, TOneAtomPair > | |
| ProtoMol::NonbondedCutoffSystemForce< TCellManager, TOneAtomPair > | |
| ProtoMol::NonbondedFullEwaldSystemForce< TBoundaryConditions, TCellManager, real, reciprocal, correction, TSwitchingFunction > | |
| ProtoMol::NonbondedFullEwaldSystemForceBase | |
| ProtoMol::NonbondedFullSystemForce< TOneAtomPair > | |
| ProtoMol::NonbondedFullSystemForceBase | |
| ProtoMol::NonbondedMultiGridSystemForce< TBoundaryConditions, TCellManager, TInterpolation, TKernel, direct, correction, smooth > | |
| ProtoMol::NonbondedMultiGridSystemForceBase | |
| ProtoMol::NonbondedPMEwaldSystemForce< TBoundaryConditions, TCellManager, real, reciprocal, correction, TInterpolation, TSwitchingFunction > | |
| ProtoMol::NonbondedPMEwaldSystemForceBase | |
| ProtoMol::NonbondedSimpleFullSystemForce< TOneAtomPair > | |
| ProtoMol::NonbondedSimpleFullSystemForceBase | |
| ProtoMol::NonStandardIntegrator | |
| ProtoMol::NoseNVTLeapfrogIntegrator | |
| ProtoMol::NotSameMoleculeConstraint | |
| ProtoMol::NPTVerletIntegrator | |
| ProtoMol::NVTVerletIntegrator | |
| ProtoMol::ObjectDefinition | |
| ProtoMol::OneAtomPair< TBoundaryConditions, TSwitchingFunction, TNonbondedForce, TConstraint > | |
| ProtoMol::OneAtomPairFull< TBoundaryConditions, TSwitchingFunction, TNonbondedForce, TConstraint > | |
| ProtoMol::OneAtomPairTwo< TBoundaryConditions, TSwitchingFunctionFirst, TNonbondedForceFirst, TSwitchingFunctionSecond, TNonbondedForceSecond, TConstraint > | |
| ProtoMol::OneAtomPairTwoFull< TBoundaryConditions, TSwitchingFunctionFirst, TNonbondedForceFirst, TSwitchingFunctionSecond, TNonbondedForceSecond, TConstraint > | |
| ProtoMol::OneMollyPair< TBoundaryConditions, TSwitchingFunction, TNonbondedForce > | |
| ProtoMol::OneMollyPairTwo< TBoundaryConditions, TSwitchingFunctionFirst, TNonbondedForceFirst, TSwitchingFunctionSecond, TNonbondedForceSecond > | |
| std::ostringstream | |
| ProtoMol::Output | |
| ProtoMol::OutputCache | |
| ProtoMol::OutputCollection | |
| ProtoMol::OutputDCDTrajectory | |
| ProtoMol::OutputDiffusion | |
| ProtoMol::OutputDihedrals | |
| ProtoMol::OutputEnergies | |
| ProtoMol::OutputFactoryDetails | |
| ProtoMol::OutputFile | |
| ProtoMol::OutputFinalPDBPos | |
| ProtoMol::OutputFinalPSF | |
| ProtoMol::OutputFinalXSC | |
| ProtoMol::OutputFinalXYZBinPos | |
| ProtoMol::OutputFinalXYZBinVel | |
| ProtoMol::OutputFinalXYZPos | |
| ProtoMol::OutputFinalXYZVel | |
| ProtoMol::OutputISGProperties | |
| ProtoMol::OutputMomentum | |
| ProtoMol::OutputPaulTrap | |
| ProtoMol::OutputPDBFramePos | |
| ProtoMol::OutputScreen | |
| ProtoMol::OutputTemperatures | |
| ProtoMol::OutputXYZTrajectoryForce | |
| ProtoMol::OutputXYZTrajectoryPos | |
| ProtoMol::OutputXYZTrajectoryVel | |
| ProtoMol::PairIntSorted | Pair of sorted int, where first <= second |
| ProtoMol::PAR | |
| ProtoMol::PAR::Angle | |
| ProtoMol::PAR::Bond | |
| ProtoMol::PAR::Dihedral | |
| ProtoMol::PAR::Hbond | This structure holds data for hydrogen bonds, including the well depth and the minimum radius |
| ProtoMol::PAR::Improper | |
| ProtoMol::PAR::Nbfix | |
| ProtoMol::PAR::Nonbonded | This structure holds data for a nonbonded - including |
| ProtoMol::Parallel | |
| ProtoMol::ParallelEnum | |
| ProtoMol::Parameter | |
| ProtoMol::PARReader | |
| ProtoMol::PARWriter | |
| ProtoMol::PaulTrapExtendedForce< TBoundaryConditions > | |
| ProtoMol::PaulTrapExtendedForceBase | |
| ProtoMol::PaulTrapIntegrator | |
| ProtoMol::PDB | |
| ProtoMol::PDB::PDBAtom | |
| ProtoMol::PDBReader | |
| ProtoMol::PDBWriter | |
| ProtoMol::PeriodicBoundaryConditions | |
| ProtoMol::PGM | |
| ProtoMol::PGMReader | |
| ProtoMol::PGMWriter | |
| ProtoMol::PLeapfrogIntegrator | |
| ProtoMol::PNGWriter | |
| ProtoMol::PPM | |
| ProtoMol::PPMReader | |
| ProtoMol::PPMWriter | |
| ProtoMol::Proxy | |
| ProtoMol::PSF | |
| ProtoMol::PSF::Acceptor | |
| ProtoMol::PSF::Angle | |
| ProtoMol::PSF::Atom | |
| ProtoMol::PSF::Bond | |
| ProtoMol::PSF::Dihedral | |
| ProtoMol::PSF::Donor | |
| ProtoMol::PSF::Improper | |
| ProtoMol::PSF::Ngrp | |
| ProtoMol::PSF::Nonbonded | |
| ProtoMol::PSFReader | |
| ProtoMol::PSFWriter | |
| ProtoMol::RangeSwitchingFunction< TOriginalSwitchingFunction > | |
| ProtoMol::RangeSwitchingFunctionBase | |
| ProtoMol::Reader | |
| ProtoMol::ReducedHessAngle | |
| ProtoMol::ReducedHessCoulomb | |
| ProtoMol::ReducedHessLennardJones | |
| ProtoMol::ReducedHessTraits< CoulombForce > | |
| ProtoMol::ReducedHessTraits< LennardJonesForce > | |
| ProtoMol::RefArray< T, N > | |
| ProtoMol::RefArray< T, 1 > | |
| ProtoMol::Report::reportlevel | |
| ProtoMol::SameMoleculeConstraint | |
| ProtoMol::ScalarStructure | |
| ProtoMol::TypeSelection::SelectType< size, A, B > | |
| ProtoMol::TypeSelection::SelectTypeCheck< A, size > | |
| ProtoMol::TypeSelection::SelectTypeCheckHelper< cmp, A > | |
| ProtoMol::TypeSelection::SelectTypeCheckHelper< true, A > | |
| ProtoMol::TypeSelection::SelectTypeHelper< cmp, A, B > | |
| ProtoMol::TypeSelection::SelectTypeHelper< true, A, B > | |
| ProtoMol::SemiGenericTopology< TBoundaryConditions > | |
| ProtoMol::ShadowHMCIntegrator | |
| ProtoMol::ShiftSwitchingFunction | |
| ProtoMol::ShiftSwitchingFunctionBase | |
| ProtoMol::SphericalSystemForce | |
| ProtoMol::Stack< T > | |
| ProtoMol::StandardIntegrator | |
| std::stringbuf | |
| std::stringstream | |
| std::stringstreambase | |
| ProtoMol::STSIntegrator | |
| ProtoMol::SystemCompareForce | |
| ProtoMol::SystemForce | |
| ProtoMol::SystemTimeForce | |
| ProtoMol::Text | |
| ProtoMol::ThermostatEnum | |
| ProtoMol::TimeForce | |
| ProtoMol::Timer | |
| ProtoMol::TimeRep | |
| ProtoMol::TimerStatistic | |
| ProtoMol::Topology< TBoundaryConditions, TCellManager > | |
| ProtoMol::TopologyFactoryDetails | |
| ProtoMol::Torsion | |
| ProtoMol::TRANS | |
| ProtoMol::TRANS::AtomType | |
| ProtoMol::TRANSReader | |
| ProtoMol::TripleInt | Triple of int |
| ProtoMol::UmbrellaIntegrator | |
| ProtoMol::UniversalSwitchingFunction | |
| ProtoMol::UniversalSwitchingFunctionBase | |
| ProtoMol::VacuumBoundaryConditions | |
| ProtoMol::Value | |
| ProtoMol::Value::Holder< ValueTrait, Constraint > | |
| ProtoMol::Value::PlaceHolder | |
| ProtoMol::Value::Undefined | |
| ProtoMol::ValueEnum | |
| ProtoMol::ValueEnum::Enum2ValueType< e > | |
| ProtoMol::ValueTraits< bool > | BOOL |
| ProtoMol::ValueTraits< char[n]> | |
| ProtoMol::ValueTraits< const char[n]> | |
| ProtoMol::ValueTraits< int > | INT |
| ProtoMol::ValueTraits< Real > | REAL |
| ProtoMol::ValueTraits< std::string > | STRING |
| ProtoMol::ValueTraits< std::vector< Real > > | VECTOR |
| ProtoMol::ValueTraits< unsigned int > | UINT |
| ProtoMol::ValueTraits< ValueType::Force > | FORCE |
| ProtoMol::ValueTraits< ValueType::Integrator > | INTEGRATOR |
| ProtoMol::ValueTraits< Vector3D > | VECTOR3D |
| ProtoMol::Vector< T > | |
| ProtoMol::Vector3D | |
| ProtoMol::Vector3DBlock | |
| ProtoMol::VectorPacker< T, N > | |
| ProtoMol::WrapperMetaForce | |
| ProtoMol::Writer | |
| ProtoMol::XFigWriter | |
| ProtoMol::XSC | |
| ProtoMol::XSCReader | |
| ProtoMol::XSCWriter | |
| ProtoMol::XYZ | |
| ProtoMol::XYZBinReader | |
| ProtoMol::XYZBinWriter | |
| ProtoMol::XYZReader | |
| ProtoMol::XYZTrajectoryReader | |
| ProtoMol::XYZTrajectoryWriter | |
| ProtoMol::XYZWriter | |
| zomplex | |
Last update: . GNU GENERAL PUBLIC LICENSE, copyrighted by the University of Notre Dame and the University of
Bergen, Norway.
