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Design of Molecular Quantum-Dot Cellular Automata Cell
Figure 3:
Single proposed quantum cellular automaton with solvent molecules and counterions. This represents half a cell. The effect of solvents on charge screening will be evaluated through constant temperature molecular dynamics.
Quantum Cellular Automata (QCA) are the foundation to an alternative
to transistor-based technology. The cells may occupy one of two
possible states corresponding to binary information. These states are
determined by the distribution of two electrons among four available
sites in the symmetric cell. The electrons would occupy opposite
corners to minimize electrostatic potential energy due to Coulomb
forces. Electrons are localized in these corners by energy barriers
of sufficient height between sites [91]. The electron's
transit from one site to the other can cause the electron in the other
half cell to undergo a corresponding transit. This is referred to as a
click [146], which is necessary to perform the functional
foundation for computing [123]. If the potential difference
that the electron sees between a state of opposite occupation and a
state of adjacent occupation is not large enough, the electron will
not tunnel - the cell will not click.
We will compute the electric potential barrier of the one electron
click by combining ab initio quantum mechanics and MD
simulations. The charges of the solute atoms will be obtained by
electronic structure calculation using the quantum mechanics package
GAUSSIAN98. Simulation will be carried out in canonical
ensemble with explicit solvent molecules. The solute will be immersed
in a box of solvent molecules with periodic boundary conditions. MD
will be used to let the system relax using NAMD 2.1 and
PROTOMOL. The final configuration of the cell will be
extracted and the charges of the atoms will be spread out on a 3D
grid. Thus, the electronic potential energy will be calculated. In the
simulation, we will investigate the effects of different solvents,
counteranion and temperatures on the electric potential
barrier. Fig 3 illustrates a half cell set up for
simulation. Such information could guide the control of the QCA.
Next: Mapping Protein Folding onto
Up: Applications
Previous: Protein Folding
Thomas Brandon Slabach
2000-07-28