(2) How to make it easy for the user to select software, algorithms, and parameters to solve their problems
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Simulation Requirements
ProtoMol/MDSimAid  Server
Optimal parameters
via  XML
Our solution uses performance models and machine learning to generate rules, run-time optimization to fine tune suggestions. We want to use agents and machine learning to update the rules. This is documented in Ko (2002) and Crocker et al. (2004), J. Comp. Chem.
Goal:
Recommend optimal software and architectural parameters to solve particular problems Make this easily available as web portals