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Research Publications
( Using the drop-down menu on the right to select subjects. )
Books
- A.-L. Barab á si, H. E. Stanley
Fractal Concepts in Surface Growth
(Cambridge University Press, Cambridge, 1995).
- A.-L. Barab á si, M. Krishnamurthy, F. Liu, T. Pearsall (eds.)
Epitaxial Growth – Principles and Applications
(Materials Research Society, Vol. 570, Werrendale, PA, 1999).
- J. Mirecki Millunchick, A.-L. Barabási, N. A. Modine, E. D. Jones (eds.)
Morphological and Compositional Evolution of Heteroepitaxial Semiconductor Thin Films
(Materials Research Society, Vol. 618, Werrendale, PA, 2000).
- A.-L. Barabási
Linked: The New Science of Networks
(Perseus, Cambridge, MA, 2002)
[available in Check, Chinese, Finish, Hebrew, Hungarian, Italian,
Japanese, Korean, Turkish].
- M. Newman, D. Watts, A.-L. Barabási
The Structure and Dynamics of Networks
(Princeton University Press, 2006).
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Review Articles
- A.-L. Barabási
The
physics of the Web
Physics World 14,
33-38 (2001).
- R. Albert, A.-L. Barabási
Statistical
mechanics of complex networks
Reviews of Modern Physics
74, 47-97 (2002).
- Z.N. Oltvai, A.-L. Barabási
Life’s
complexity pyramid
Science 298,
763-764 (2002).
- A.-L. Barabási, E. Bonabeau
Scale-free
networks
Scientific American 288,
60-69 (2003).
- A.-L. Barabási, Z.N. Oltvai
Network
Biology: Understanding the cell’s functional organization
Nature Reviews Genetics 5, 101-113
(2004).
- A.-L. Barabási
Taming
complexity
Nature Physics 1,
68-70 (2005).
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Book Chapters
- D. Futer, A.-L. Barabási, S. V. Buldyrev, S. Havlin, H. Makse
Rough surfaces, in Fractals in Science (Springer-Verlag, New York, 1994).
- J.K. Furdyna, S. Lee, A.-L. Barabási, J.L. Merz
Self-Organized Low-Dimensional II-VI Nanostructures, in II-VI Semiconductor Materials and Their Applications, edited by M.C. Tamargo (Gordon and Breach Science Publishers, 1999).
- A.-L. Barabási
Emergence of scaling in complex networks in, Handbook of Graphs and Networks (Wiley VHC, Weinheim, 2003).
- A.-L. Barabási, Z. Dezso, E. Ravasz, S.-H. Yook, Z. Oltvai
Scale-Free and hierarchical structures in complex networks, Modeling of Complex Systems: Seventh Granada Lectures, Spain (2002) (AIP, Melville New York, 2003).
- S. Wuchty, E. Ravasz, A.-L. Barabási
The Architecture of Biological Networks, in T.S. Deisboeck, J. Yasha Kresh and T.B. Kepler (eds.) Complex Systems in Biomedicine (Kluwer Academic Publishing, New York, 2003).
- A.-L. Barabási, Z. N. Oltvai, S. Wuchty
Part IV: Biological Networks, in E. Ben-Naim, H. Frauenfelder, Z. Toroczkai (eds.) Complex Networks, Lect. Notes Phys., 650 (Springer, Berlin Heidelberg, 2004).
- A.-L. Barabási
Science of Networks from Society to the Web in Kristof Nyiri (ed.), A Sense of Place: The Global and the Local in Mobile Communication (Passagen Verlag, Vienna, 2005).
- E. Almaas and A.-L. Barabási
The Architecture of Complexity: From the WWW to Cellular Metabolism
in A.T. Skjeltorp and A. V. Belushkin (eds.)
Dynamics of Complex Interconnected Systems: Networks and Bioprocesses
NATO Sciences Series, Springer and IOS Press Amsterdam (2006).
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Chaos and Fractals
- A.-L. Barabási, L. Nitsch, I.A. Dorobantu
Supertracks and nth order windows in the chaotic regime
Physics
Letters A 139, 53-56 (1989).
- A.-L. Barabási, L. Nitsch, I.A. Dorobantu
On crises and supertracks: An attempt of a unified theory
Revue
Roumanie de Physique 34, 353-357 (1989).
- A.-L. Barabási, T. Vicsek
Tracing
a diffusion-limited-aggregate: Self-affine versus self-similar
scaling
Physical Review A 41, 6881-6883 (1990).
- A.-L. Barabási, T. Vicsek
Self-similarity
of the loop structure of diffusion-limited-aggregates
Journal
of Physics A 23, L729-L733 (1990).
- A.-L. Barabási, T. Vicsek
Multifractality
of self-affine fractals
Physical Review A 44, 2730-2733 (1991).
- A.-L. Barabási, P. Szepfalusy, T. Vicsek
Multifractal spectra of multi-affine functions
Physica A 178, 17-28 (1991).
- T. Vicsek, A.-L. Barabási
Multi-affine
model for the velocity distribution in fully turbulent flows
Journal of Physics A 24, L845-L851 (1991).
- A.-L. Barabási, R. Bourbonnais, M. Jensen, J. Kertesz, T. Vicsek, Y.-C. Zhang
Multifractality
of growing surfaces
Physical Review A 45, R6951-R6954 (1992).
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Rough Surface
- A.-L. Barabási, T. Vicsek
Multifractality of self-affine
fractals
Physical Review A 44, 2730-2733 (1991).
- A.-L. Barabási
A
model for the temporal fluctuations of the surface width: A stochastic
one-dimensional map
Journal of Physics A 24, L1013-L1019 (1991).
- A.-L. Barabási, R. Bourbonnais, M. Jensen, J. Kertesz, T. Vicsek, Y.-C. Zhang
Multifractality
of growing surfaces
Physical Review A 45, R6951-R6954 (1992).
- S.V. Buldyrev, A.-L. Barabási, F. Caserta, S. Havlin, H.E. Stanley, T. Vicsek
Anomalous
interface roughening in porous media: Experiment and model
Physical Review A 44, R8313-R8316 (1992).
- A.-L. Barabási, M. Araujo, H.E. Stanley
Three-dimensional
Toom model: Connection to the Kardar-Parisi-Zhang Equation
Physical Review Letters 68, 3729-3732 (1992).
- A.-L. Barabási
Dynamic
scaling of coupled nonequilibrium interfaces
Physical Review A 46, R2977- R2980 (1992).
- S.V. Buldyrev, A.-L. Barabási, S. Havlin, J. Kertesz, H.E. Stanley, H.S. Xenias
Anomalous roughening of interfaces in porous media: Experiment and model
in International Conference on Fractals and Disordered Systems, Hamburg, Germany, July 1992; Physica A 191, 220-226 (1992).
- A.-L. Barabási
Surfactant-mediated
growth of nonequilibrium interfaces
Physical Review Letters 70, 4102-4105 (1993).
- A.-L. Barabási
Surfactant-mediated surface growth: Nonequilibrium theory
Fractals 1, 846-859 (1993).
- L.A.N. Amaral, A.-L. Barabási, S. V. Buldyrev, S. Havlin, H. E. Stanley
Anomalous interface roughening: The role of a gradient in the density of pinning sites, Fractals 1, 818-826 (1993).
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- L.A.N. Amaral, A.-L. Barabási, S. V. Buldyrev, S. Havlin, H. E. Stanley
A
new exponent characterizing the effect of evaporation on imbibition
experiments
Physical Review Letters 72, 641-644 (1994).
- L.A.N. Amaral, A.-L. Barabási, H. E. Stanley
Universality
classes for interface growth with quenched disorder
Physical Review Letters 73, 62-65 (1994).
- L.A.N. Amaral, A.-L. Barabási, S. V. Buldyrev, S.T. Harrington, S. Havlin, R. Sadr-Lahijani, H. E. Stanley
Avalanches
and the directed percolation depinning model: Experiments, simulations
and theory
Physical Review E 51, 4655-4673 (1995).
- L.A.N. Amaral, A.-L. Barabási, H.A. Makse, H. E. Stanley
Scaling
properties of driven interfaces in disordered media
Physical Review E 52, 4087-5005 (1995).
- A.-L. Barabási, G. Grinstein, M.A. Munoz
Directed
surfaces in disordered media
Physical Review Letters 76, 1481-1484 (1996).
- H. A. Makse, A.-L. Barabási, H. E. Stanley
Elastic
string in a random medium
Physical Review E 53 6573-6576 (1996).
- A.-L. Barabási, E. Kaxiras
Dynamic
scaling in conserved systems with coupled fields: Application
to surfactant-mediated growth
Europhysics Letters 36, 129-134
(1996).
- A.-L. Barabási
Roughening
of growing surfaces: Kinetic models and continuum theories
Computational Materials Science 6, 127-134 (1996).
- S. V. Buldyrev, L. A. N. Amaral, A.-L. Barabási, S. T. Harrington, S. Havlin, R. Sadr, H. E. Stanley
Avalanches
and the Directed Percolation Depinning Model
[Proc. International Conf. on "Future of Fractals"] Fractals 4, 307-319 (1996).
- R. Albert, A.-L. Barabási, N. Carle, A. Dougherty
Driven
interfaces in disordered media: determination of universality
classes from experimental data
Physical Review Letters 81, 2926-2929 (1998)
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Materials Science
- A.-L. Barabási
Surfactant-mediated
growth of nonequilibrium interfaces
Physical Review Letters
70, 4102-4105 (1993).
- A.-L. Barabási
Surfactant-mediated surface growth: Nonequilibrium theory, Fractals 1, 846-859 (1993).
- P. Jensen, A.-L. Barabási, H. Larralde, S. Havlin, H.E. Stanley
Controlling
nanostructures
Nature 368, 22 (1994).
- P. Jensen, A.-L. Barabási, H. Larralde, S. Havlin, H.E. Stanley
Model
incorporating deposition, diffusion, and aggregation in submonolayer
nanostructures
Physical Review E 50, 618-621 (1994).
- R. Cuerno, A.-L. Barabási
Dynamic
scaling of ion-sputtered surfaces
Physical Review Letters 74, 4746-4749 (1995).
- P. Jensen, A.-L. Barabási, H. Larralde, S. Havlin, H. E. Stanley
Growth
and percolation of thin films: A model incorporating deposition,
diffusion, and aggregation, Chaos, Solutions, and Fractals
6, 227-232 (1995).
- A.-L. Barabási, E. Kaxiras
Dynamic
scaling in conserved systems with coupled fields: Application
to surfactant-mediated growth
Europhysics Letters 36, 129-134
(1996).
- A.-L. Barabási
Roughening
of growing surfaces: Kinetic models and continuum theories
Computational Materials Science 6, 127-134 (1996).
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- A.-L. Barabási
Self-organized
superlattice formation in II-VI and III-V semiconductors
Applied Physics Letters 70, 764-767 (1996).
- P. Jensen, A.-L. Barabási, H. Larralde, S. Havlin, H. E. Stanley
Fractal models for thin film growth
in [Proc. International Conference on the Future of Fractals, Aichi, Japan, 25-27 July, 1995] Fractals 4, 321-329 (1996).
- I. Daruka, A.-L. Barabási
Island
formation and critical thickness in heteroepitaxy
Physical Review Letters 78, 3027 (1997).
- A.-L. Barabási
Self-assembled
island formation in heteroepitaxial growth
Applied Physics Letters 70, 2565-2567 (1997).
- I. Daruka, A.-L. Barabási
Dislocation
free island formation in heteroepitaxial growth: a study at equilibrium
Physical Review Letters 79, 3708-3711 (1997).
- M. A. Makeev, A.-L. Barabási
Ion-induced
effective surface diffusion in ion sputtering
Applied Physics Letters 71, 2800-2802 (1997).
- J. K. Furdyna, S. Lee, I. Daruka, C.S. Kim, A.-L. Barabási, M. Dobrowolska, J.L. Merz
Self-assembled growth of II-VI quantum dots
Nonlinear Optics 18, 85-92 (1997).
- M. A. Makeev, A.-L. Barabási
Secondary
ion changes on rippled interfaces
Applied Physics Letters 72, 906-908 (1998).
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- I. Daruka, A.-L. Barabási
Equilibrium
phase diagrams for dislocation free self-assembled quantum dots
Applied Physics Letters 72, 2102-2104 (1998).
- M. A. Makeev, A.-L. Barabási
Effect
of the surface roughness on the secondary ion yield in ion sputtering
Applied Physics Letters 73, 1445-1447 (1998).
- S. Lee, I. Daruka, C. S. Kim, A.-L. Barabási, J. L. Merz, J. K. Furdyna
Dynamics
of ripening of self-assembled II-VI semiconductor quantum dots
Physical Review Letters 81, 3479-3482 (1998).
- C. Lee, A.-L. Barabási
Spatial
ordering of self-organized islands grown on patterned surfaces
Applied Physics Letters 73, 2651-2653 (1998).
- I. Daruka, J. Tersoff, A.-L. Barabási
Shape
transition in growth of strained islands
Physical Review
Letters 82, 2753-2756 (1999).
- S. Lee, I. Daruka, C. S. Kim, A.-L. Barabási, J. K. Furdyna, J. L. Merz
Comment
on, Dynamics of ripening of self-assembled II-VI semiconductor
quantum dots, Lee et al. reply
Physical Review Letters 83
240 (1999).
- Daruka, A.-L. Barabási, S.J. Zhou, T.C. Germann, P.S. Lomdahl, A.R. Bishop
Molecular
dynamics investigation of the surface stress distribution in a
Si/Ge quantum dot superlattice
Physical Review B 60, R2150-R2153
(1999).
- S. Park, B. Kahng, H. Jeong, A.-L. Barabási
Dynamics
of ripple formation in sputter erosion: nonlinear phenomena
Physical Review Letters 83, 3486-3489 (1999).
Go Top
- A.-L. Barabási
Thermodynami
and kinetic mechanisms in self-assembled quantum dot formation
Materials Science and Engineering B 67, 23-30 (1999).
- B. Kahng, H. Jeong, A.-L. Barabási
Quantum
dot and hole formation in sputter erosion
Applied Physics
Letters 78, 805-807 (2001).
- B. Kahng, H. Jeong, A.-L. Barabási
Nanoscale
structure formation on sputter eroded surface
Journal of
the Korean Physical Society 39, 421-424 (2001).
- C.S. Lee, B. Kahng, A.-L. Barabási
Spatial
ordering of stacked quantum dots
Applied Physics Letters
78, 984-986 (2001).
- M. Makeev, R. Cuerno, A.-L. Barabási
Morphology
of ion-sputtered surfaces
Nuclear Instruments and Methods
B 197, 185-227 (2002).
- H. Jeong, B. Kahng, S. Lee, C. Y. Kwak, A.-L. Barabási, J. K. Furdyna
Monte
Carlo simulation of sinusoidally modulated superlattice growth
Physical Review E 65, 031602 (2002).
- J. Kim, B. Kahng, A.-L. Barabási
Nanoscale
wire formation on sputter-eroded surfaces
Applied Physics
Letters 81, 3654-3656 (2002).
- M.A. Makeev, A.-L. Barabási
Effect
of surface morphology on the sputtering yields: I. Ion sputtering
from self-affine surfaces
Nuclear Instruments & Methods in
Physics Research Section B-Beam Interactions with Materials and
Atoms 222, 316-334 (2004).
- M.A. Makeev, A.-L. Barabási
Effect
of surface morphology on the sputtering yields: II. Ion sputtering
from rippled surfaces
Nuclear Instruments & Methods In Physics
Research Section B-Beam Interactions with Materials and Atoms
222, 335-354 (2004).
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Biophysics
- B. Suki, A.-L. Barabási, K. Lutchen
Lung tissue viscoelasticity: A mathematical framework and its molecular basis
Journal Applied Physiology 76, 2749-2759 (1994).
- B. Suki, A.-L. Barabási, Z. Hantos, F. Petak, H. E. Stanley
Avalanches
and power law behavior in lung inflation
Nature 368, 615-618 (1994).
- P. Jensen, A.-L. Barabási, H. Larralde, S. Havlin, H. E. Stanley
Deposition,
diffusion and aggregation of atoms on surfaces: A model for nanostructure
growth
Physical Review B 50, 15316-15329 (1994).
- P. Jensen, A.-L. Barabási, H. Larralde, S. Havlin, H.E. Stanley
Connectivity of diffusing particles continually deposited on a surface: Relation to LECBD experiments
[ Proc. of ETOPIM-3, Mexico, 1993] Physica A 207, 219-227 (1994).
- A.-L. Barabási, S.V. Buldyrev, H. E. Stanley, B. Suki
Avalanches
in the lung: A statistical mechanical approach
Physical Review Letters 76, 2192-2195 (1996).
- U. Frey, M. Silverman, A.-L. Barabási, B. Suki
Irregularities
and power law distributions in the breathing pattern in preterm
and term infants
Journal of Applied Physiology 85, 789-797 (1998).
- H. Jeong, B. Tombor, R. Albert, Z. Oltvai, A.-L. Barabási
The
large-scale organization of metabolic networks
Nature 407,
651-655 (2000).
- H. Jeong, S.P. Mason, A.-L. Barabási, Z.N. Oltvai
Lethality and centrality in protein networks
Nature 411, 41-42 (2001).
Go Top
- J. Podani, Z. N. Oltvai, H. Jeong, B. Tombor, A.-L. Barabási, E. Szathmary
Comparable
system-level organization of Archea and Eucaryotes
Nature
Genetics 29, 54-56 (2001).
- R.J. Williams, N.D. Martinez, E.L. Berlow, J.A. Dunne, A.-L. Barabási
Two
degrees of separation in complex food webs
Proceedings of
the National Academy of Sciences 99, 12913-12916 (2002).
- E. Ravasz, A. L. Somera, D. A. Mongru, Z. N. Oltvai, A.-L. Barabási
Hierarchical
organization of modularity in metabolic networks
Science
297, 1551-1555 (2002).
- Z. N. Oltvai, A.-L. Barabási
Life's
complexity pyramid
Science 298, 763-764 (2002).
- 101. H. Jeong, Z.N. Oltvai, A.-L. Barabási
Prediction
of protein essentiality based on genomic data
ComPlexUs 1,
19-28 (2003).
- I. Farkas, H. Jeong, T. Vicsek, A.-L. Barabási, Z. N. Oltvai
The
topology of the transcription regulatory network in the yeast
S. cerevisiae
Physica A 318, 601-612 (2003).
- Z. Dezso, Z.N. Oltvai, A.-L. Barabási
Bioinformatics
analysis of experimentally determined protein complexes in the
yeast Saccharomyces cerevisiae
Genome Research 13, 2450-2454
(2003).
- G. Balazsi, K. A. Kay, A.-L. Barabási, Z. Oltvai
Spurious
spatial periodicity of co-expression in microarray data due to
printing design
Nucleic Acids Research 31, 4425-4433 (2003).
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- S. Y. Gerdes, M. D. Scholle, J. W. Campbell, G. Balazsi, E. Ravasz, M. D. Daugherty, A. L. Somera, N. C. Kyrpides, I. Anderson, M. S. Gelfand, A. Bhattacharya, V. Kapatral, M. D'Souza, M. V. Baev, Y. Grechkin, F. Mseeh, M. Y. Fonstein, R. Overbeek, A.-L. Barabási, Z. N. Oltvai, A. L. Osterman
Experimental
determination and system level analysis of essential genes in
Escherichia coli MG1655
Journal of Bacteriology 185, 5673-5684
(2003).
- S. Wuchty, Z. N. Oltvai, A.-L. Barabási
Evolutionary
conservation of motif constituents in the yeast protein interaction
network
Nature Genetics 35, 176-179 (2003).
- R. Dobrin, Q.K. Beg, A.-L. Barabási
Aggregation
of topological motifs in the Escherichia coli transcriptional
regulatory networks
BMC Bioinformatics 5, 10 (2004).
- E. Almaas, B. Kovacs, T. Vicsek, Z. N. Oltvai, A.-L. Barabási
Global
organization of metabolic fluxes in the bacterium Escherichia
coli
Nature 427, 839-843 (2004).
- S. Y. Yook, Z. N. Oltvai, A.-L. Barabási
Functional
and topological characterization of protein interaction networks
Proteomics 4, 928-942 (2004).
- A.-L. Barabási, Z. N. Oltvai
Network
Biology: Understanding the Cell's Functional Organization
Nature Reviews Genetics 5, 101-113 (2004).
- G. Balazsi, A.-L. Barabási, Z. N. Oltvai
Topological
units of environmental signal processing in the transcriptional
regulatory network of Escherichia coli
Proceedings of the
National Academy of Sciences 102: 7841-7846 (2005).
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Statistical Mechanics
- A.-L. Barabási
Invasion
percolation and global optimization
Physical Review Letters 76, 3750-3753 (1996).
- P. Molinas-Mata, M.A. Munoz, D.O. Martinez, A.-L. Barabási
The
ballistic random walker
Physical Review E 54, 968-971 (1996).
- I. Derenyi, C.-S. Lee, A.-L. Barabási
Ratchet
effect in surface electromigration: smoothing surfaces by an AC
field
Physical Review Letters 80, 1473-1476 (1998).
- A. Czirok, A.-L. Barabási, T. Vicsek
Collective
motion of self-propelled particles: Kinetic phase transition in
one dimension
Physical Review Letters 82, 209-212 (1999).
- C.-S. Lee, B. Janko, I. Derenyi, A.-L. Barabási
Reducing
vortex density in superconductors using the ratchet effect
Nature 400, 337-340 (1999).
- Z. Neda, E. Ravasz, Y. Brechet, T. Vicsek, A.-L. Barabási
Self-organizing
processes: The sound of many hands clapping
Nature 403, 849-850
(2000).
- A.-L. Barabási, V.W. Freeh, H. Jeong, J. Brockman
Parasitic
computing
Nature 412, 894-897 (2001).
- I. Yang, H. Jeong, B. Kahng, A.-L. Barabási
Emerging
behavior in electronic bidding
Physical Review E 68, 016102
(2003).
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Granular Media
- D. J. Hornbaker, R. Albert, I. Albert, A.-L. Barabási, P. Schiffer
Why
sand castles stand: an experimental study of wet granular media
Nature 387, 765 (1997).
- R. Albert, I. Albert, D. Hornbaker, P. Schiffer, A.-L. Barabási
Maximum
angle of stability in wet and dry spherical granular media
Physical Review E 56, R6271-R6274 (1997).
- R. Albert, M.A. Pfeifer, P. Schiffer, A.-L. Barabási
Slow
drag in granular medium
Physical Review Letters 82 205-208 (1999).
- A.-L. Barabási, R. Albert, P. Schiffer
The
physics of sandcastles: Maximum angle of stability in wet and
dry granular media
Physica A 266, 366-371 (1999).
- P. Tegzes, R. Albert, M. Paskvan, A.-L. Barabasi, T. Vicsek, P. Schiffer
Liquid-induced
transitions in granular media
Physical Review E 60, 5823-5826
(1999).
- I. Albert, P. Tegzes, B. Kahng, R. Albert, J.G. Sample, M. Pfeifer, A.-L. Barabási, T. Vicsek, P. Schiffer
Jamming
and fluctuations in granular drag
Physical Review Letters
84, 5122-5125 (2000).
- I. Albert, P. Tegzes, R. Albert, J.G. Sample, A-L. Barabási, T. Vicsek, B. Kahng, P. Schiffer
Stick-slip
fluctuations in granular drag
Physical Review E, 031307 (2001).
- B. Kahng, I. Albert, P. Schiffer, A.-L. Barabási
Modeling
relaxation and jamming in granular media
Physical Review
E 64, 051303 (2001).
- I. Albert, J. G. Sample, A. J. Morss, S. Rajagopalan, A.-L. Barabási, P. Schiffer
Granular
drag on a discrete object: Shape effects on jamming
Physical
Review E 64, 061303 (2001).
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Complex Networks
- R. Albert, H. Jeong, A.-L. Barabási
Diameter
of the world wide web
Nature 401, 130-131 (1999).
- A.-L. Barabási, R. Albert
Emergence
of scaling in random networks
Science 286, 509-512 (1999).
- A.-L. Barabási, R. Albert, H. Jeong
Mean-field
theory for scale-free random networks
Physica A 272, 173-187
(1999).
- R. Albert, A.-L. Barabási
Dynamics
of complex systems: Scaling laws for the period of boolean networks
Physical Review Letters 84, 5660-5663(2000).
- A.-L. Barabási, R. Albert, H. Jeong
Scale-free
characteristics of random networks: The topology of the world
wide web
Physica A 281, 69-77 (2000).
- A.-L. Barabási, R. Albert, H. Jeong, G. Bianconi
Power-law
distribution of the World Wide Web
Science 287, 2115 (2000).
- R. Albert, H. Jeong, A.-L. Barabási
Error
and attack tolerance of complex networks
Nature 406, 378-482
(2000).
- H. Jeong, B. Tombor, R. Albert, Z. Oltvai, A.-L. Barabási
The
large-scale organization of metabolic networks
Nature 407,
651-655 (2000).
- R. Albert, A.-L. Barabási
Topology
of complex networks: Local events and universality
Physical
Review Letters 85, 5234-5237 (2000).
Go Top
- H. Jeong, S.P. Mason, A.-L. Barabási, Z.N. Oltvai
Lethality
and centrality in protein networks
Nature 411, 41-42 (2001).
- G. Bianconi, A.-L. Barabási
Bose-Einstein
condensation in complex networks
Physical Review Letters
86, 5632-5635 (2001).
- J. Podani, Z. N. Oltvai, H. Jeong, B. Tombor, A.-L. Barabási, E. Szathmary
Comparable
system-level organization of Archea and Eucaryotes
Nature
Genetics 29, 54-56 (2001).
- A.-L. Barabási, E. Ravasz, T. Vicsek
Deterministic
scale-free networks
Physica A 299, 559-564 (2001).
- I. Farkas, I. Derenyi, A-L. Barabási, T. Vicsek
Spectra
of "real-world" graphs: Beyond the semi-circle law
Physical
Review E 64 , 026704 (2001).
- S. H. Yook, H. Jeong, A.-L. Barabási, Y. Tu
Weighted
evolving networks
Physical Review Letters 86, 5835-5838 (2001).
- G. Bianconi, A.-L. Barabási
Competition
and multiscaling in evolving networks
Europhysics Letters
54, 436-442 (2001).
- R.J. Williams, N.D. Martinez, E.L. Berlow, J.A. Dunne, A.-L. Barabási
Two
degrees of separation in complex food webs
Proceedings of
the National Academy of Sciences 99, 12913-12916 (2002).
Go Top
- A.L. Barabási, H. Jeong, Z. Neda, E. Ravasz, A. Schubert, T. Vicsek
Evolution
of the social network of scientific collaborations
Physica
A 311, 590-614 (2002).
- R. Albert, A.-L. Barabási
Statistical
mechanics of complex networks
Reviews of Modern Physics 74,
47-97 (2002).
- Z. Dezso, A.-L. Barabási
Halting
viruses in scale-free networks
Physical Review E 65, 055103(R)
(2002).
- S. H. Yook, H. Jeong, A.-L. Barabási
Modeling
the internet's large-scale topology
Proceedings of the National
Academy of Sciences 99, 13382-13386 (2002).
- E. Ravasz, A. L. Somera, D. A. Mongru, Z. N. Oltvai, A.-L. Barabási
Hierarchical
organization of modularity in metabolic networks
Science
297, 1551-1555 (2002).
- N. Schwartz, R. Cohen, D. ben-Avraham, A.-L. Barabási, S. Havlin
Percolation
in directed scale-free networks
Physical Review E 66, 015104(R)
(2002).
- Z. N. Oltvai, A.-L. Barabási
Life's
complexity pyramid
Science 298, 763-764 (2002).
- I. Farkas, I. Derenyi, H. Jeong, Z. Neda, Z.N. Oltvai, E. Ravasz, A. Schubert, A.-L. Barabási, T. Vicsek
Networks
in life: scaling properties and eigenvalue spectra
Physica
A 314, 25-34 (2002).
- H. Jeong, Z.N. Oltvai, A.-L. Barabási
Prediction
of protein essentiality based on genomic data
ComPlexUs 1,
19-28 (2003).
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- I. Farkas, H. Jeong, T. Vicsek, A.-L. Barabási, Z. N. Oltvai
The
topology of the transcription regulatory network in the yeast
S. cerevisiae
Physica A 318, 601-612 (2003).
- E. Ravasz, A.-L. Barabási
Hierarchical
organization in complex networks
Physical Review E 67, 026112
(2003).
- Z. Dezso, Z.N. Oltvai, A.-L. Barabási
Bioinformatics
analysis of experimentally determined protein complexes in the
yeast Saccharomyces cerevisiae
Genome Research 13, 2450-2454
(2003).
- H. Jeong, Z. Neda, A.-L. Barabási
Measuring
preferential attachment for evolving networks
Europhysics
Letters 61, 567-572 (2003).
- G. Balazsi, K. A. Kay, A.-L. Barabási, Z. Oltvai
Spurious
spatial periodicity of co-expression in microarray data due to
printing design
Nucleic Acids Research 31, 4425-4433 (2003).
- S. Y. Gerdes, M. D. Scholle, J. W. Campbell, G. Balazsi, E. Ravasz, M. D. Daugherty, A. L. Somera, N. C. Kyrpides, I. Anderson, M. S. Gelfand, A. Bhattacharya, V. Kapatral, M. D'Souza, M. V. Baev, Y. Grechkin, F. Mseeh, M. Y. Fonstein, R. Overbeek, A.-L. Barabási, Z. N. Oltvai, A. L. Osterman
Experimental
determination and system level analysis of essential genes in
Escherichia coli MG1655
Journal of Bacteriology 185, 5673-5684
(2003).
- S. Wuchty, Z. N. Oltvai, A.-L. Barabási
Evolutionary
conservation of motif constituents in the yeast protein interaction
network
Nature Genetics 35, 176-179 (2003).
- R. Dobrin, Q.K. Beg, A.-L. Barabási
Aggregation
of topological motifs in the Escherichia coli transcriptional
regulatory networks
BMC Bioinformatics 5, 10 (2004).
- E. Almaas, B. Kovacs, T. Vicsek, Z. N. Oltvai, A.-L. Barabási
Global
organization of metabolic fluxes in the bacterium Escherichia
coli
Nature 427, 839-843 (2004).
Go Top
- S. Y. Yook, Z. N. Oltvai, A.-L. Barabási
Functional
and topological characterization of protein interaction networks
Proteomics 4, 928-942 (2004).
- M. Argollo de Menezes andA.-L.
Barabási
Fluctuations
in network dynamics
Physical Review Letters
92, 028701 (2004).
- A.-L. Barabási, Z. N. Oltvai
Network
Biology: Understanding the Cell's Functional Organization
Nature Reviews Genetics 5, 101-113 (2004).
- A.-L. Barabási, M. Argollo de Menezes, S. Balensiefer, J. Brockman
Hot
spots and universality in network dynamics
Europhysics Journal
B 38, 169-175 (2004).
- M. Argollo de Menezes, A.-L. Barabási
Separating
the internal and external dynamics of complex systems
Physical
Review Letters 93, 068701 (2004).
- L.A.N. Amaral, A. Barrat, A.-L. Barabási, G. Caldarelli, P. De los Rios, A. Erzan, B. Kahng, R. Mantegna, J.F.F. Mendes, R. Pastor-Satorras, A. Vespignani
Virtual
Round Table on ten leading questions for network research
European Physics Journal B 38, 143-145 (2004).
- A. Vazquez, R. Dobrin, D. Sergi, J.-P. Eckmann, Z.N. Oltvai, A.-L. Barabási
The
topological relationship between the large-scale attributes and
local interactions patterns of complex networks
Proceedings
of the National Academy of Sciences 101, 17940-17945 (2004).
- Z. Eisler, J. Kertesz, S.-H. Yook, A.-L. Barabási
Multiscalling
and non-universality in fluctuations of driven complex systems
Europhysics Letters 69, pp. 664-670 (2005).
Go Top
- P. J. Macdonald, E. Almaas, A.-L. Barabási
Minimum
spanning trees of weighted scale-free networks
Europhysics
Letters 72 (2): 308-314 (2005).
- A. Vazquez, J. G. Oliveira, A.-L. Barabási
Inhomogeneous
evolution of subgraphs and cycles in complex networks
Physical
Review E 71, 025103(Rd) (2005).
- M.A. Makeev, I. Derenyi I, A.-L. Barabási
Emergence
of large-scale vorticity during diffusion in a random potential
under an alternating bias
Physical Review E 71 (2), 026112
(2005).
- A.-L. Barabási
Network
Theory - The emergence of creative enterprise
Science 308,
639 (2005).
- A.-L. Barabási
The
origin of bursts and heavy tails in humans dynamics
Nature 207, 435 (2005).
- G. Balazsi, A.-L. Barabási, Z. N. Oltvai
Topological
units of environmental signal processing in the transcriptional
regulatory network of Escherichia coli
Proceedings of the
National Academy of Sciences 102: 7841-7846 (2005).
- J.G. Oliveira, A.-L. Barabási
Darwin
and Einstein correspondence patterns
Nature 437, 1251 (2005).
- A.-L. Barabási
Taming
complexity
Nature Physics 1, 68-70 (2005).
- Marta C. González and Albert-László Barabási
From data to models
Nature Physics, VOL 3, (April 2007).
- Gergely Palla, Albert-László Barabási & Tamás Vicsek
Quantifying social group evolution
Nature 446 (7136), 664-667 (4/5/2007).
[Supplementary
Material]
- Denis Dupuy*, Nicolas Bertin*, César A. Hidalgo R.*, Kavitha Venkatesan, Domena Tu, David Lee, Jennifer Rosenberg, Nenad Svrzikapa, Aurélie Blanc, Alain Carnec, Anne-Ruxandra Carvunis, Rock Pulak, Jane Shingles, John Reece-Hoyes, Rebecca Newbury, Ryan Viveiros, William A. Mohler, Christian Le Peuch, Ian A. Hope, Robert Johnsen
Genome-scale analysis of in vivo spatiotemporal promoter activity in C. elegans
Nature Biotechnology 25 (6), 663-668 (6/6/2007).
Go Top
Biological Networks
- H. Jeong, B. Tombor, R. Albert, Z. Oltvai, A.-L. Barabási
The
large-scale organization of metabolic networks
Nature 407,
651-655 (2000).
- H. Jeong, S.P. Mason, A.-L. Barabási, Z.N. Oltvai
Lethality
and centrality in protein networks
Nature 411, 41-42 (2001).
- J. Podani, Z. N. Oltvai, H. Jeong, B. Tombor, A.-L. Barabási, E. Szathmary
Comparable
system-level organization of Archea and Eucaryotes
Nature
Genetics 29, 54-56 (2001).
- R.J. Williams, N.D. Martinez, E.L. Berlow, J.A. Dunne, A.-L. Barabási
Two
degrees of separation in complex food webs
Proceedings of
the National Academy of Sciences 99, 12913-12916 (2002).
- E. Ravasz, A. L. Somera, D. A. Mongru, Z. N. Oltvai, A.-L. Barabási
Hierarchical
organization of modularity in metabolic networks
Science
297, 1551-1555 (2002).
- Z. N. Oltvai, A.-L. Barabási
Life's
complexity pyramid
Science 298, 763-764 (2002).
- H. Jeong, Z.N. Oltvai, and A.-L. Barabási
Prediction
of protein essentiality based on genomic data
ComPlexUs 1, 19-28 (2003).
- I. Farkas, H. Jeong, T. Vicsek, A.-L. Barabási, Z. N. Oltvai
The
topology of the transcription regulatory network in the yeast
S. cerevisiae
Physica A 318, 601-612 (2003).
- Z. Dezso, Z.N. Oltvai, A.-L. Barabási
Bioinformatics
analysis of experimentally determined protein complexes in the
yeast Saccharomyces cerevisiae
Genome Research 13, 2450-2454
(2003).
- G. Balazsi, K. A. Kay, A.-L. Barabási, Z. Oltvai
Spurious
spatial periodicity of co-expression in microarray data due to
printing design
Nucleic Acids Research 31, 4425-4433 (2003).
Go Top
- S. Y. Gerdes, M. D. Scholle, J. W. Campbell, G. Balazsi, E. Ravasz, M. D. Daugherty, A. L. Somera, N. C. Kyrpides, I. Anderson, M. S. Gelfand, A. Bhattacharya, V. Kapatral, M. D'Souza, M. V. Baev, Y. Grechkin, F. Mseeh, M. Y. Fonstein, R. Overbeek, A.-L. Barabási, Z. N. Oltvai, A. L. Osterman
Experimental
determination and system level analysis of essential genes in
Escherichia coli MG1655
Journal of Bacteriology 185, 5673-5684
(2003).
- S. Wuchty, Z. N. Oltvai, A.-L. Barabási
Evolutionary
conservation of motif constituents in the yeast protein interaction
network
Nature Genetics 35, 176-179 (2003).
- R. Dobrin, Q.K. Beg, A.-L. Barabási
Aggregation
of topological motifs in the Escherichia coli transcriptional
regulatory networks
BMC Bioinformatics 5, 10 (2004).
- E. Almaas, B. Kovacs, T. Vicsek, Z. N. Oltvai, A.-L. Barabási
Global
organization of metabolic fluxes in the bacterium Escherichia
coli
Nature 427, 839-843 (2004).
- S. Y. Yook, Z. N. Oltvai, A.-L. Barabási
Functional
and topological characterization of protein interaction networks
Proteomics 4, 928-942 (2004).
- A.-L. Barabási, Z. N. Oltvai
Network
Biology: Understanding the Cell's Functional Organization
Nature Reviews Genetics 5, 101-113 (2004).
- A. Vazquez, R. Dobrin, D. Sergi, J.-P. Eckmann, Z.N. Oltvai, A.-L. Barabási
The
topological relationship between the large-scale attributes and
local interactions patterns of complex networks
Proceedings of the Nat'l Academy of Sciences 101, 17940-17945
(2004). [Supplementary
Material S1, S2, S3, S4, S5, S6, S7, S8]
- G. Balazsi, A.-L. Barabási, Z. N. Oltvai
Topological
units of environmental signal processing in the transcriptional
regulatory network of Escherichia coli
Proceedings of the
National Academy of Sciences 102: 7841-7846 (2005).
- Eivind Almaas, Z. N. Oltvai, A.-L. Barabási
The
Activity Reaction Core and Plasticity of Metabolic Networks
PLOS Computational Biology (2005)
- Alexei Vazquez, Balázs Rácz, András Lukács, Albert-László Barabási
Impact of non-Poissonian activity patterns on spreading processes
Physical Review Letters 98 (15), No. 158702 (4/10/2007).
- Jukka-Pekka Onnela, Jari Saramäki, Jörkki Hyvönen, Gábor Szabó, M Argollo de Menezes, Kimmo Kaski, Albert-László Barabási and János Kertész
Analysis of a large-scale weighted network of one-to-one human communication
New Journal of Physics 9, 1-27 (6/28/2007).
- Vanessa Vermeirssen, M. Inmaculada Barrasa, César Hidalgo, Jenny Aurielle B. Babon, eynaldo Sequerra, Lynn Doucette-Stamm, Albert-László Barabási, Albertha J.M. Walhout
Transcription factor modularity in a Gene-Centered C. elegans Protein-DNA interaction network
Genome Research 17, 061-1071 (7/7/2007).
[Supplementary
Material]
Go Top
Papers in Proceedings
- S. Havlin, A.-L. Barabási, S.V. Buldyrev, C.K. Peng, M. Schwartz, H.E. Stanley, T. Vicsek
Anomalous interface roughening: Experiment and models, in Growth Patterns in Physical Sciences and Biology (E. Louis, L. Sander and P. Meakin, eds.)
[PROC. 1991 NATO ADVANCED RESEARCH WORKSHOP, Granada, Spain, October 1991] (Plenum, NY, 1993), pp. 85–98.
- A.-L. Barabási, S.V. Buldyrev, S. Havlin, G. Huber, H.E. Stanley, T. Vicsek
Imbibition in porous media: Experiment and theory in Surface disordering: Growth, roughening and phase transitions (R. Jullien, J. Kert´esz, P.Meakin, and D.E. Wolf, eds.)
[PROC. OF THE LES HOUCHES WORKSHOP, 1992] (Nova Science, New York 1992).
- R. Cuerno, A.-L. Barabási
Roughening by ion bombardment: A stochastic continuum equation
[PROC. MATERIALS RESEARCH SOCIETY Fall Meeting, 299-304, Boston 1994] (Materials Research Society, Pittsburgh, 1994).
- A.-L. Barabási, R. Cuerno
Fractal and non-fractal surfaces in ion sputtering
[Disordered Materials and Interfaces, PRO. MATERIALS RESEARCH SOCIETY Fall Meeting, Vol. 407, Pg. 259, Boston 1995] (Materials Research Society, Pittsburgh, 1995).
- P. Jensen, L. Bardotti, A.-L. Barabási, H. Larralde, S. Havlin, H.E. Stanley
Why are computer simulations of growth useful? in Disordered Materials and Interfaces
[PROC. SYMPOSIUM OF MATERIALS RESEARCH SOCIETY, 1995], edited by H. Z. Cummins, D. J. Durian, D. L. Johnson, and H. E. Stanley (Materials Research Society, Pittsburgh, 1996), pp. 391–398.
Go Top
- A.-L. Barabási, M.A. Makeev, C.S. Lee, R. Cuerno
Roughening of ion-eroded surfaces, in Dynamics of Fluctuating Interfaces and Related Phenomena
[The 4th CTP Workshop on Statistical Physics, Seoul, Korea, January 27-31, 1997], edited by D. Kim, H. Park, and B. Kahng (World Scientific, Singapore, 1997), pg. 131–150.
- J.L. Merz, A.-L. Barabási, R.S. Williams, J.K. Furdyna
Nanostructure self assembly as an emerging technology, in Future trends in microelectronics: Off the beaten path”, edited by S. Luryi, J. Xu, and A. Zaslavsky (Wiley, 1999).
- C.-S. Lee, I. Der´enyi, A.-L. Barabási
Smoothing surfaces by an ac field: an application of the ratchet effect, in Epitaxial growth
[PROC. SYMPOSIUM OF MATERIALS RESEARCH SOCIETY, SAN FRANCISCO, 1999] edited by A.L. Barabasi, F.Liu, and T. Pearsall (Materials Research Society, Pittsburgh, 1999).
- A.-L. Barabási, B. Kahng, H. Jeong, S. Park
Nonlinear ripple formation in sputter erosion
[PROC. SYMPOSIUM OF MATERIALS RESEARCH SOCIETY, Boston, 1999] edited by E. Chason, B. Cooper, and B. Harper (Materials Research Society, Pittsburgh, 2000).
- I. Albert, P. Tegzes, R. Albert, J. Sample, A.-L. Barabási, T, Vicsek, B. Kahng, P. Schiffer
An experimental study of the fluctuations in granular drag
[PROC. SYMPOSIUM OF MATERIALS RESEARCH SOCIETY, San Francisco, Spring 2000] (Materials Research Society, Pittsburgh, 2000).
Go Top
- A.-L. Barabási, Z. Dezs¨o, E. Ravasz, S.-H. Yook, Z. Oltvai
Scale-Free and hierarchical structures in complex networks
[SEVENTH GRANADA LECTURES, Spain (2002) Modeling of Complex Systems (AIP, Melville New York, 2003).
- A.-L. Barabási, E. Ravasz, Z. Oltvai
Hierarchical organization of modularity in complex networks
[PROC. OF THE XVIII SITGES CONFERENCE ON STATISTICAL MECHANICS, Sitges, Barcelona, Spain, June 2002], Eds. R. Pastor-Satorras, J. M. Rubi, and A. Diaz-Guilera (Springer, Berlin, 2003).
- A.-L. Barabási, M. A. de Menezes
Hot
spots and universality in network dynamics
[PROC. OF THE CONFERENCE ON GROWING NETWORKS AND GRAPHS IN STATISTICAL PHYSICS: FINANCE, BIOLOGY AND SOCIAL SYSTEMS, Rome 2003], Europhysics Journal B (in press, 2003).
- A. Vazquez, R. Dobrin, D. Sergi, J.-P. Eckmann, Z.N. Oltvai, A.-L. Barabási
The
topological relationship between the large-scale attributes and
local interactions patterns of complex networks
Proceedings
of the Nat'l Academy of Sciences 101, 17940-17945 (2004).
[Supplementary
Material S1, S2, S3, S4, S5, S6, S7, S8]
- J.-P. Onnela, J. Saramäki, J. Hyvönen, G. Szabó, D. Lazer, K. Kaski, J. Kertész, and A.-L. Barabási
Structure and tie strengths in mobile communication networks
Proceedings
of the Nat'l Academy of Sciences 104, 7332–7336 (2007).
[Supplementary
Material]
- J.-P.Onnela, J. Saramaki, J. Hyvonen, G. Szabo, D. Lazer, K. Kaski,
J. Kertesz, A.-L. Barabasi
Structure and tie strengths in mobile communication networks
Proceedings of the National Academy of Sciences 104 (18), 7332-7336 (5/1/2007).
[Supplementary
Material]
- K.-I. Goh, M. E. Cusick, D. Valle, B. Childs, M. Vidal, A.-L. Barabasi
The human disease network
Proceedings of the National Academy of Sciences 104 (21), 8685 (5/22/2007).
Book and Journal Reviews
- A.-L. Barabási
Across the boundaries: Review of Interfaces and Free Boundaries
Nature 407, 297 (2000).
- A.-L. Barabási
Review of Evolution of Networks: From Biological Nets to the Internet and WWW
Physics Today (in press, 2004).
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Talks (.ppt)
- Albert-László Barabási
The architecture of complexity, ASIST Annual Conference
2006 Austin, TX
[PPT]
- Albert-László Barabási, Zoltán N. Oltvai, H. Jeong, R. Albert, E. Ravasz,
G. Bianconi, E. Almaas
The Architecture of Complexity: From the topology of the WWW to cell's genetic network
2005 Norway [PPT]
- Albert-László Barabási
The Architecture of Complexity: From the WWW to network biology
2004 Princeton [PPT]
- Albert-László Barabási, Zoltán N. Oltvai, H. Jeong, R. Albert, E. Ravasz,
G. Bianconi, E. Almaas
The Architecture of Complexity: From the topology of the WWW to cell's genetic network
2004 India [PPT]
- Albert-László Barabási
Linked: Networks from Biology to the World Wide Web
[ Audio-English
] [ Audio-Hungarian
]
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